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The defining skeletal differences are mostly in the pelvis, which undergoes much of its development in puberty. Intervention in those years should allow for trans teens to develop along affirming physiological lines, rather than being mutilated by a dysphoric puberty.
Buuuuut I did overstate my case, though; such early treatment is still on the rarer side, so it doesn't look like there's definitive answers on how that impacts skeletal development. We can draw conclusions, I think, but the literature is mostly focused on the psychological development rather than looking at physiology.
Yeah, possibly needs more research. I read something about bone density being mostly unchanged, but that may also be intervention age dependant as well. Also, as a fairly contentious issue, the literature is also prone to biases.
Thanks for your response though, I appreciate it :)