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I did basically what you are trying to do:
I installed Calibre docker on my server machine with the DB local (important because the DB won't work over a share) and the book storage on the NAS.
Then I installed Calibre-web docker and pointed it to the same local DB and the same book storage on the NAS.
Now I can use Calibre for import, DRM removal, metadata updates, etc. And I use Calibre-web for user management, OPDS feed, etc.
Let me know if you want more info.